In addition to many bug fixes and stability improvements, Juicebox 1.5 has many enhancements, including an improved UI (chromosome axes, scrolling options, etc) and publication quality figure exports (in SVG and PDF formats)!
Watch this short video for a quick overview of Juicebox!
If you use Juicebox in your research, please cite:
Neva C. Durand*, James T. Robinson*, Muhammad S. Shamim, Ido Machol, Jill P. Mesirov, Eric S. Lander, and Erez Lieberman Aiden. "Juicebox provides a visualization system for Hi-C contact maps with unlimited zoom." Cell Systems 3(1), 2016.
Suhas S.P. Rao*, Miriam H. Huntley*, Neva C. Durand, Elena K. Stamenova, Ivan D. Bochkov, James T. Robinson, Adrian L. Sanborn, Ido Machol, Arina D. Omer, Eric S. Lander, Erez Lieberman Aiden. "A 3D Map of the Human Genome at Kilobase Resolution Reveals Principles of Chromatin Looping." Cell 159, 2014.
* contributed equally